FastQCFastQC Report
Tue 24 Mar 2026
SAMPLE_A_R1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSAMPLE_A_R1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8
Total Bases600 bp
Sequences flagged as poor quality0
Sequence length75
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTATAACAGGCTCCTACTGTGAGTGCCGCCGGCTTTTGAAAAAGTATAGC112.5No Hit
CTAAAAGAATATCCAAGATACTAGCAAGTTCTAGTATCTCGTTTTTAATA112.5No Hit
GGGTTTCGTTCAAGATAGCCATTGATTTTCGATACCCATTTACCGTTATC112.5No Hit
AACACCAATCAACTTTGAACGATAACCGAATAATCGAGTGCGCATACATC112.5No Hit
AGATACTAGCAAGTTCTAGTATCTCGTTTTTAATAATGACCGACGTATGC112.5No Hit
GGGTCTTGTAGACCTATGACTCTCCAGTCTAGATTTTCACGTGGAAGGAG112.5No Hit
TTAAGAACAATGCCGAGCGTAAGCCGTCAGCCGAGGTTCCGTCGCGAACG112.5No Hit
AGGGAATGAGATTGCTTCTGTACCACCGTGAAAGCATACCTACAAAGGTT112.5No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)